[ckan-dev] issues while enabling ckanext-spatial extension

Ross Jones ross at servercode.co.uk
Mon Aug 10 10:00:25 UTC 2015


A quick google for the error (last line of log) with

 ckan AttributeError: /usr/lib/libgeos_c.so.1: undefined symbol: GEOSCovers

returned 

http://stackoverflow.com/questions/25873463/libgeos-c-so-undefined-symbol-geosisclosed

which looks like it may have a solution to your problem.

Hope this helps

Ross



> On 10 Aug 2015, at 09:37, Naresh N <naresh919 at gmail.com> wrote:
> 
> Dear All,
>  Please help to resolve following   issue.
> 
> Thanks&Regards,
> Naresh
> 
> On Thu, Aug 6, 2015 at 5:30 PM, <ckan-dev-request at lists.okfn.org> wrote:
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> Today's Topics:
> 
>    1. Fwd: issues while enabling ckanext-spatial extension and
>       customized url Base map (Naresh N)
> 
> 
> ----------------------------------------------------------------------
> 
> Message: 1
> Date: Thu, 6 Aug 2015 12:10:45 +0530
> From: Naresh N <naresh919 at gmail.com>
> To: ckan-dev at lists.okfn.org
> Subject: [ckan-dev] Fwd: issues while enabling ckanext-spatial
>         extension and customized url Base map
> Message-ID:
>         <CAKAPXzNkfe5WXZn=QYZumg8iQzSB_tFRnCroB+oQhauPuvSNbw at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
> 
> Dear All,
> 
>  I have installed   CKAN production set-up on Ubuntu 12.04   64 bit
> machine.
> 
> 1.   ckanext-spatial extension issue
>  And followed instructions given in
> http://docs.ckan.org/projects/ckanext-spatial/en/latest/install.html to
> enable the spatial extenion of CKAN i.e  ckanext-spatial. After doing this
> if I am opening  CKAN page it is showing  messages 500-some internal error
> occurred. Please find the attached error log file.
> and suggest me to resolve the issue.
> 2. Customized url for Base Map change
> a.  Is it necessary to enable ckanext-spatial extension to  change the base
> map option.
> 
> Please suggest me to resolve the issues
> Thanks in advance.
> 
> Thanks&Regards,
> Naresh
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> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1] mod_wsgi (pid=3845): Target WSGI script '/etc/ckan/default/apache.wsgi' cannot be loaded as Python module.
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1] mod_wsgi (pid=3845): Exception occurred processing WSGI script '/etc/ckan/default/apache.wsgi'.
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1] Traceback (most recent call last):
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/etc/ckan/default/apache.wsgi", line 10, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     application = loadapp('config:%s' % config_filepath)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 247, in loadapp
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     return loadobj(APP, uri, name=name, **kw)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 272, in loadobj
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     return context.create()
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 710, in create
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     return self.object_type.invoke(self)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 146, in invoke
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     return fix_call(context.object, context.global_conf, **context.local_conf)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/util.py", line 56, in fix_call
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     val = callable(*args, **kw)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/config/middleware.py", line 58, in make_app
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     load_environment(conf, app_conf)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/config/environment.py", line 232, in load_environment
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     p.load_all(config)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 134, in load_all
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     load(*plugins)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 148, in load
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     service = _get_service(plugin)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 254, in _get_service
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     return plugin.load()(name=plugin_name)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/distribute-0.6.24-py2.7.egg/pkg_resources.py", line 1989, in load
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     entry = __import__(self.module_name, globals(),globals(), ['__name__'])
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/src/ckanext-spatial/ckanext/spatial/plugin.py", line 42, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     from ckanext.spatial.lib import save_package_extent, validate_bbox, bbox_query, bbox_query_ordered
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/src/ckanext-spatial/ckanext/spatial/lib/__init__.py", line 8, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     from shapely.geometry import asShape
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geometry/__init__.py", line 4, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     from .base import CAP_STYLE, JOIN_STYLE
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geometry/base.py", line 9, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     from shapely.coords import CoordinateSequence
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/coords.py", line 8, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     from shapely.geos import lgeos
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geos.py", line 145, in <module>
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     prototype(_lgeos, geos_version)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/ctypes_declarations.py", line 252, in prototype
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     lgeos.GEOSCovers.restype = c_byte
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/python2.7/ctypes/__init__.py", line 378, in __getattr__
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     func = self.__getitem__(name)
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]   File "/usr/lib/python2.7/ctypes/__init__.py", line 383, in __getitem__
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1]     func = self._FuncPtr((name_or_ordinal, self))
> [Thu Aug 06 11:45:37 2015] [error] [client 127.0.0.1] AttributeError: /usr/lib/libgeos_c.so.1: undefined symbol: GEOSCovers
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1] mod_wsgi (pid=3844): Target WSGI script '/etc/ckan/default/apache.wsgi' cannot be loaded as Python module.
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1] mod_wsgi (pid=3844): Exception occurred processing WSGI script '/etc/ckan/default/apache.wsgi'.
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1] Traceback (most recent call last):
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/etc/ckan/default/apache.wsgi", line 10, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     application = loadapp('config:%s' % config_filepath)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 247, in loadapp
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     return loadobj(APP, uri, name=name, **kw)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 272, in loadobj
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     return context.create()
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 710, in create
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     return self.object_type.invoke(self)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 146, in invoke
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     return fix_call(context.object, context.global_conf, **context.local_conf)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/util.py", line 56, in fix_call
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     val = callable(*args, **kw)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/config/middleware.py", line 58, in make_app
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     load_environment(conf, app_conf)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/config/environment.py", line 232, in load_environment
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     p.load_all(config)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 134, in load_all
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     load(*plugins)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 148, in load
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     service = _get_service(plugin)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 254, in _get_service
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     return plugin.load()(name=plugin_name)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/distribute-0.6.24-py2.7.egg/pkg_resources.py", line 1989, in load
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     entry = __import__(self.module_name, globals(),globals(), ['__name__'])
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/src/ckanext-spatial/ckanext/spatial/plugin.py", line 42, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     from ckanext.spatial.lib import save_package_extent, validate_bbox, bbox_query, bbox_query_ordered
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/src/ckanext-spatial/ckanext/spatial/lib/__init__.py", line 8, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     from shapely.geometry import asShape
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geometry/__init__.py", line 4, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     from .base import CAP_STYLE, JOIN_STYLE
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geometry/base.py", line 9, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     from shapely.coords import CoordinateSequence
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/coords.py", line 8, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     from shapely.geos import lgeos
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geos.py", line 145, in <module>
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     prototype(_lgeos, geos_version)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/ctypes_declarations.py", line 252, in prototype
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     lgeos.GEOSCovers.restype = c_byte
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/python2.7/ctypes/__init__.py", line 378, in __getattr__
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     func = self.__getitem__(name)
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]   File "/usr/lib/python2.7/ctypes/__init__.py", line 383, in __getitem__
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1]     func = self._FuncPtr((name_or_ordinal, self))
> [Thu Aug 06 11:45:49 2015] [error] [client 127.0.0.1] AttributeError: /usr/lib/libgeos_c.so.1: undefined symbol: GEOSCovers
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1] mod_wsgi (pid=3844): Target WSGI script '/etc/ckan/default/apache.wsgi' cannot be loaded as Python module.
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1] mod_wsgi (pid=3844): Exception occurred processing WSGI script '/etc/ckan/default/apache.wsgi'.
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1] Traceback (most recent call last):
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/etc/ckan/default/apache.wsgi", line 10, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     application = loadapp('config:%s' % config_filepath)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 247, in loadapp
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     return loadobj(APP, uri, name=name, **kw)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 272, in loadobj
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     return context.create()
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 710, in create
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     return self.object_type.invoke(self)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/loadwsgi.py", line 146, in invoke
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     return fix_call(context.object, context.global_conf, **context.local_conf)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/paste/deploy/util.py", line 56, in fix_call
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     val = callable(*args, **kw)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/config/middleware.py", line 58, in make_app
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     load_environment(conf, app_conf)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/config/environment.py", line 232, in load_environment
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     p.load_all(config)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 134, in load_all
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     load(*plugins)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 148, in load
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     service = _get_service(plugin)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/ckan/plugins/core.py", line 254, in _get_service
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     return plugin.load()(name=plugin_name)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/lib/python2.7/site-packages/distribute-0.6.24-py2.7.egg/pkg_resources.py", line 1989, in load
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     entry = __import__(self.module_name, globals(),globals(), ['__name__'])
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/src/ckanext-spatial/ckanext/spatial/plugin.py", line 42, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     from ckanext.spatial.lib import save_package_extent, validate_bbox, bbox_query, bbox_query_ordered
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/ckan/default/src/ckan/src/ckanext-spatial/ckanext/spatial/lib/__init__.py", line 8, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     from shapely.geometry import asShape
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geometry/__init__.py", line 4, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     from .base import CAP_STYLE, JOIN_STYLE
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geometry/base.py", line 9, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     from shapely.coords import CoordinateSequence
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/coords.py", line 8, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     from shapely.geos import lgeos
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/geos.py", line 145, in <module>
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     prototype(_lgeos, geos_version)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/local/lib/python2.7/dist-packages/shapely/ctypes_declarations.py", line 252, in prototype
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     lgeos.GEOSCovers.restype = c_byte
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/python2.7/ctypes/__init__.py", line 378, in __getattr__
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     func = self.__getitem__(name)
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]   File "/usr/lib/python2.7/ctypes/__init__.py", line 383, in __getitem__
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1]     func = self._FuncPtr((name_or_ordinal, self))
> [Thu Aug 06 11:45:50 2015] [error] [client 127.0.0.1] AttributeError: /usr/lib/libgeos_c.so.1: undefined symbol: GEOSCovers
> 
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> End of ckan-dev Digest, Vol 58, Issue 6
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