[ckan4rdm] using CKAN as research data repository

Marta Hoffman-Sommer m.hoffman-sommer at icm.edu.pl
Fri Jan 16 09:24:12 UTC 2015


Thanks a lot for the hints - this is great help. We are now looking at 
your extensions in detail, together with my colleagues. The DOI 
extension should work for us, I think, and that's very important (we're 
aware that we will need a contract for this). I'll be watching for your 
embargo extension. And if we stick to our decision of using CKAN (which 
we most likely will), then I will certainly have more questions.

Best,
Marta



W dniu 2015-01-16 o 05:03, Florian May pisze:
> Marta, Ben,
>
> this is highly interesting! I'm using CKAN to archive all the research 
> datasets without a proper home (dedicated data warehouse).
>
> +1 on embargoing! We run one instance with all datasets set to 
> "public" inside our well-protected intranet, and one completely 
> separate (because I feared accidental leaks) instance facing outside. 
> As we work with sensitive data about threatened species, our data 
> release process is painfully manual and goes across several desks, so 
> there's no automation yet. It would be great to have some sort of 
> auditable data release sign-off, possibly triggering a push to the 
> external site.
>
> Great to hear about ckanext-doi! I'll have to have a chat with the 
> Australian National Data Service, who offered to mint DOIs for us, 
> whether that offer would extent to a modified ckanext-doi.
>
> Ben, FYI our colleagues at the WA Museum have just adopted 
> CollectiveAccess for their collection data management: 
> http://www.gaiaresources.com.au/collectiveaccess-powerful-flexible-collection-management/ 
>
>
> Cheers,
> Florian
>
> On Fri, Jan 16, 2015 at 12:23 AM, Ben Scott <ben at benscott.co.uk 
> <mailto:ben at benscott.co.uk>> wrote:
>
>     Hi Maria -
>
>     We’re using CKAN as a repository for our research and collections
>     data here at the Natural History Museum, London
>     -http://data.nhm.ac.uk/.
>
>     1) Embargoing datasets - this is on our roadmap and a high
>     priority so we should be writing an extension for this soon.
>
>     2) Batch upload - we’ve built data import pipelines using
>     Spotify’s Luigi framework (https://github.com/spotify/luigi) and
>     the CKAN api. It’s very specialised for our collections database
>     though, and not implemented as an extension - but it might be
>     useful (https://github.com/NaturalHistoryMuseum/ke2mongo).
>
>     3) We’ve written an extension for assigning DataCite DOIs -
>     https://github.com/NaturalHistoryMuseum/ckanext-doi (You will need
>     a contract with DataCite / their national representative to be
>     able to mint DOIs).
>
>     Cheers,
>     Ben
>
>     -----------------------------------
>     Data Portal Lead Architect
>     Biodiversity Informatics,
>     Natural History Museum,
>     London
>     +44 (0) 207 942 4277 <tel:%2B44%20%280%29%20207%20942%204277>
>
>     On 15 Jan 2015, at 13:57, Marta Hoffman-Sommer
>     <m.hoffman-sommer at icm.edu.pl <mailto:m.hoffman-sommer at icm.edu.pl>>
>     wrote:
>
>     > Hi everyone,
>     >
>     > We're planning an open research data repository which will serve
>     the whole scientific community in Poland and we're seriously
>     considering to use CKAN for this purpose. I was wondering if some
>     of you have already implemented CKAN as a stand-alone repository
>     (not part of a data management system)? Is anybody aware of CKAN
>     extensions that would enable (1) embargoing dataset release, (2)
>     batch upload and edition of multiple files, or (3) DOI assignment
>     and display? We have been unsuccessfully searching for these on
>     the web.
>     >
>     > Best,
>     > Marta
>     >
>     > --
>     > Marta Hoffman-Sommer
>     > Open Science Platform
>     > ICM University of Warsaw
>     > http://pon.edu.pl
>     >
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-- 
Marta Hoffman-Sommer
Open Science Platform
ICM University of Warsaw
http://pon.edu.pl

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