[open-science] geo-microbiology

[Peter Murray-Rust]

Thanks Tom,
Thinking about the subject I think we can identify several simple
vocabularies:
* microbial species. We should be able to do this already
* metal ions and oxidation states (also possible)
* minerals by name (e.g. chrysotile)
* your keywords

The key to success is:
* the results should be useful
* people are prepared to contribute simple vocabularies - Ross created one
in a relatively short time.

The problem is access - EuropePMC probably doesn't cover much of this so we
need to identify journals and build a crawler.



On Tue, Feb 4, 2014 at 9:50 AM, Tom Olijhoek <tom.olijhoek at gmail.com> wrote:

> possible key words are 'rock dust' , geomicrobiology, natural fertiliser,
> soil microbiology, soil ecology, mineral fertiliser
> The idea for this community is part of a proposal that I want to submit
>  for a project in the IDRC  openscidev program.
>
>
>
> On Tue, Feb 4, 2014 at 10:30 AM, Peter Murray-Rust <pm286 at cam.ac.uk>wrote:
>
>> What a great idea. Are there any phrases or entities that could identify
>> papers from the text or figure content? Then we could try to mine open
>> access papers.
>>
>>
>> On Tue, Feb 4, 2014 at 9:25 AM, Tom Olijhoek <tom.olijhoek at gmail.com>wrote:
>>
>>>  Dear all,
>>> I am trying to find out if there are open science initiatives in the
>>> area of geo-microbiology.
>>> this research area combines geology with microbiology for development of
>>> better natural fertilisers. Especially for developing countries this work
>>> holds great promises for crops improvement so research is closely linked to
>>> practice.
>>> If any of the visitors of this list is working in this area, knows
>>> people who work in this area, can point me to sources for open access
>>> articles on geo-microbiology please let me know.
>>> final goal of the excercise is establishing an open science network for
>>> this research field
>>>
>>> --
>>> Tom Olijhoek
>>> Codex Consult
>>> www.codexconsult.eu
>>> coordinator @ccess open access working group  at OKF
>>> DOAJ  member of Advisory Board
>>> freelance advisor for the WorldBank Publishing Group
>>> TEL +(31)645540804
>>> SKYPE tom.olijhoek
>>> Twitter   @ccess
>>> LinkedIn  http://nl.linkedin.com/in/tomolijhoek/
>>>
>>>
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>>>
>>
>>
>> --
>> Peter Murray-Rust
>> Reader in Molecular Informatics
>> Unilever Centre, Dep. Of Chemistry
>> University of Cambridge
>> CB2 1EW, UK
>> +44-1223-763069
>>
>
>
>
> --
> Tom Olijhoek
> Codex Consult
> www.codexconsult.eu
> coordinator @ccess open access working group  at OKF
> DOAJ  member of Advisory Board
> freelance advisor for the WorldBank Publishing Group
> TEL +(31)645540804
> SKYPE tom.olijhoek
> Twitter   @ccess
> LinkedIn  http://nl.linkedin.com/in/tomolijhoek/
>
>
> _______________________________________________
> open-science mailing list
> open-science at lists.okfn.org
> https://lists.okfn.org/mailman/listinfo/open-science
> Unsubscribe: https://lists.okfn.org/mailman/options/open-science
>
>


-- 
Peter Murray-Rust
Reader in Molecular Informatics
Unilever Centre, Dep. Of Chemistry
University of Cambridge
CB2 1EW, UK
+44-1223-763069
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