[open-science] Google Summer of Code 2014 options?

[Bastian Greshake]

Hey, 
I think doing a blogpost is a great idea to get the word out for all the different projects.   

For the more language specific bioinformatics projects there is the Open Bioinformatics Foundation which is participating with BioPython, BioPerl, BioJava, BioSQL and BioHaskell [0] and the BioJS project is also participating [1]. 

Cheers,
Bastian

[0] http://www.open-bio.org/wiki/Google_Summer_of_Code
[1] https://rostlab.org/services/biojs/gsoc.html

On Mar 4, 2014, at 12:50 , Egon Willighagen wrote:

> Hi all,
> 
> another year, another Google Summer of Code. And again it is possible
> to work on Open Source tools in the area of chemistry.
> 
> Below are a few things that I have spotted. What else is out there?
> 
> * NRNB mentoring organization [0]
> - Cytoscape has a chemical structure viz plugin based on the CDK that
> needs updating
> - PathVisio has a chemical structure viz plugin based on the CDK that
> needs updating
> - There is a project idea to integrate Cytoscape into Bioclipse
> - There is a project idea to integrate PathVisio into Bioclipse
> * VTK mentoring organization [1]
> - various chemistry related ideas
> * ScaffoldHunter (GPLv3) [2]
> - no specific ideas, but based on the CDK, and could use updating to CDK 1.5
> 
> The above list is pretty much chemistry oriented, but there are many
> other scientific domains represented among the 190 mentoring
> organizations too.
> 
> Maybe we can also have a blog post on the OKFN network about this?
> 
> Timing is tight... there is one week left for students to discuss
> project ideas and start working on applications (there will be
> ranking, and the position are awarded to the best candidates...) as
> the submission deadline is March 21. See
> http://www.google-melange.com/gsoc/events/google/gsoc2014
> 
> Egon
> 
> 0.http://nrnb.org/gsoc/index.html#ideas-tab
> 1.http://www.vtk.org/Wiki/VTK/GSoC
> 2.http://scaffoldhunter.sourceforge.net/wiki/doku.php?id=project_ideas
> 
> -- 
> E.L. Willighagen
> Department of Bioinformatics - BiGCaT
> Maastricht University (http://www.bigcat.unimaas.nl/)
> Homepage: http://egonw.github.com/
> LinkedIn: http://se.linkedin.com/in/egonw
> Blog: http://chem-bla-ics.blogspot.com/
> PubList: http://www.citeulike.org/user/egonw/tag/papers
> ORCID: 0000-0001-7542-0286
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--
// Bastian Greshake
// Zehnthofstraße 36
// 55252 Mainz-Kastel, Germany
// cell: +49 176 213 044 66
// web: www.ruleofthirds.de






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