[open-science] BioSharing - short intro and interest in exploring collaboration

Wed Aug 10 14:40:41 UTC 2011

On Wed, Aug 10, 2011 at 3:33 PM, Susanna-Assunta Sansone <
sa.sansone at gmail.com> wrote:

> **
> Hi Peter,
>
> happy to help, as we can, if you also believe we can list this in the
> BioSharing catalogue. There are 2 ways to add these:
> - via simple form at: http://biosharing.org/contact (individuals
> submitting are also acknowledged - along with collaborators and their
> logo/links- at http://biosharing.org/communities)
> - or if somebody has a list already, e.g. in an spreadsheet, we can quickly
> 'curate' it and batch loaded these.
>
>
We have a list in an HTML table:
http://www.ch.ic.ac.uk/chemime/

This is probably the most up to date.

> As we say on the site "In this *first phase*, each entry will be curated
> by the BioSharing team for consistency,
>

of what? :-)

> and individual contributors will be acknowledged. In the *next phases*, we
> will allow individuals (nominated by groups developing and maintaining
> policies or standards) to login and edit/update relevant entries. The final
> goal is to ensure the catalogues represents an up-to-date reference set for
> those seeking information on policies and standards."
>

This will be useful. We can either use Shapado or your own wiki, etc.

>
> Thanks,
> Susanna
>
>
> On 10/08/2011 15:24, Peter Murray-Rust wrote:
>
>
>
> On Wed, Aug 10, 2011 at 3:10 PM, Susanna-Assunta Sansone <
> sa.sansone at gmail.com> wrote:
>
>>
>> > I would think BioSharing could also act as registry for formats in
>> chemistry.
>>
>
>
>>
>> Sure and actually with e.g. NMR being used in metabolomics and MS in both
>> metabolomics and proteomics, these do fit into the bioarea too.
>>
>
> Let's just go ahead as quickly as possible. Much of the chemistry is
> actively used in bio-informatics - e.g. in ChEBI. FWIW see our Chemical MIME
> (http://www.ch.ic.ac.uk/chemime/iupac.html ) which has worked well and
> continues to work in chemistry.
>
> There's also lots of discussion on http://blueobelisk.shapado.com/ and the
> Blue Obelisk mailing list.
>
> P.
>
>
>
> --
> Peter Murray-Rust
> Reader in Molecular Informatics
> Unilever Centre, Dep. Of Chemistry
> University of Cambridge
> CB2 1EW, UK
> +44-1223-763069
>
>
> --
> Susanna-Assunta Sansone, PhD
>
> Team Leader
> University of Oxford
>
> Projects: www.isa-tools.org|www.mibbi.org|www.biosharing.org
>
> University of Oxford           Tel: +44(0)1865 610622
> Oxford e-Research Centre       Fax: +44(0)1865 610612
> 7 Keble Road, Oxford           skype: susanna-a.sansone
> OX1 3QG, UK                    uk.linkedin.com/in/sasansone
> --
>
>

-- 
Peter Murray-Rust
Reader in Molecular Informatics
Unilever Centre, Dep. Of Chemistry
University of Cambridge
CB2 1EW, UK
+44-1223-763069
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.okfn.org/pipermail/open-science/attachments/20110810/8d19058a/attachment-0001.html>