[open-science] citing a code and data on a GitHub repository

[Carl Boettiger]

apparently there is also http://schema.org/SoftwareApplication


On Tue, Dec 3, 2013 at 10:02 AM, Carl Boettiger <cboettig at gmail.com> wrote:

> Great question. DOAP looks pretty promising.
>
> In ecology we have our own XML-schema metadata standard for describing
> software, whose vocabulary is pretty generic:
> http://knb.ecoinformatics.org/software/eml/eml-2.1.1/eml-software.html Not
> RDF but the standard has been around for 10 years with reasonable adoption
> in our discipline.  I assume other disciplines have similar creatures.
>
> Of course language-specific repositories often have their own way of
> representing software metadata.  For instance, R packages on CRAN specify
> generic metadata such as project title, description, authors, version, url,
> bug reports, etc, in a machine-readable querable plain text format, e.g.
> http://cran.r-project.org/web/packages/XML/  Certainly there are other
> examples (cpan, etc).
>
> Would be nice if everyone wrapped some semantics like DOAP around this to
> make these things more universal.
>
> Does JORS provide a machine-readable version of the metadata in their
> descriptions?
>
>
> On Tue, Dec 3, 2013 at 9:29 AM, Brian Hole <brian.hole at ubiquitypress.com>wrote:
>
>> JORS (the Journal of Open Research Software) is another alternative:
>> http://openresearchsoftware.metajnl.com - with the additional benefit
>> that the descriptions are citable.
>>
>> - Brian
>>
>> On 3 December 2013 17:17, Tom Morris <tfmorris at gmail.com> wrote:
>>
>>> On Tue, Dec 3, 2013 at 12:10 PM, Arfon Smith <arfon at github.com> wrote:
>>>
>>>> I'd be interested to hear if there's been any effort put into how to
>>>> properly describe the function of a piece of code in a file like
>>>> BibJSON. For example, knowing that a piece of code was written in
>>>> Python, was for an astrophysics domain and performed coordinate
>>>> transformations. It feels like that could be encapsulated in some kind
>>>> of meta descriptor file which could then be indexed (and searched).
>>>>
>>>> Has anyone seen anything like this done?
>>>>
>>>
>>> DOAP? https://github.com/edumbill/doap/wiki
>>>
>>> Tom
>>>
>>> _______________________________________________
>>> open-science mailing list
>>> open-science at lists.okfn.org
>>> http://lists.okfn.org/mailman/listinfo/open-science
>>> Unsubscribe: http://lists.okfn.org/mailman/options/open-science
>>>
>>>
>>
>> _______________________________________________
>> open-science mailing list
>> open-science at lists.okfn.org
>> http://lists.okfn.org/mailman/listinfo/open-science
>> Unsubscribe: http://lists.okfn.org/mailman/options/open-science
>>
>>
>
>
> --
> Carl Boettiger
> UC Santa Cruz
> http://carlboettiger.info/
>



-- 
Carl Boettiger
UC Santa Cruz
http://carlboettiger.info/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.okfn.org/pipermail/open-science/attachments/20131203/c47f3e61/attachment.html>